clophfit.prtecan.export

Export data and fit results from Titration objects.

Functions

generate_combinations()	Generate parameter combinations for export and fitting.
apply_combination(titration, combination)	Apply a combination of parameters to the Titration.
prepare_output_folder(titration, base_path)	Prepare the output folder for a given combination of parameters.
export_residuals(outfit, fit_results, index)	Export fit residuals and their statistics to files.
export_bad_wells(outfit, global_res)	Export a list of bad wells flagged during global fits.
run_pre_fit_detection(titration, subfolder)	Run pre-fit detection of bad wells and write discarded_wells.txt.
export_fit(titration, subfolder, config)	Export all fitted parameters, plots, and data files.
export_data_fit(titration, tecan_config)	Export dat files [x,y1,..,yN] from copy of titration.data.

Module Contents

clophfit.prtecan.export.generate_combinations()

Generate parameter combinations for export and fitting.

Return type:

list[tuple[tuple[bool, Ellipsis], str]]

clophfit.prtecan.export.apply_combination(titration, combination)

Apply a combination of parameters to the Titration.

Parameters:

• titration (clophfit.prtecan.titration.Titration)

• combination (tuple[tuple[bool, Ellipsis], str])

Return type:

None

clophfit.prtecan.export.prepare_output_folder(titration, base_path)

Prepare the output folder for a given combination of parameters.

Parameters:

• titration (clophfit.prtecan.titration.Titration)

• base_path (pathlib.Path)

Return type:

pathlib.Path

clophfit.prtecan.export.export_residuals(outfit, fit_results, index)

Export fit residuals and their statistics to files.

Parameters:

• outfit (pathlib.Path)

• fit_results (dict[str, clophfit.fitting.data_structures.FitResult[Any]])

• index (int)

Return type:

None

clophfit.prtecan.export.export_bad_wells(outfit, global_res)

Export a list of bad wells flagged during global fits.

Parameters:

• outfit (pathlib.Path)

• global_res (clophfit.prtecan.titration.TitrationResults)

Return type:

None

clophfit.prtecan.export.run_pre_fit_detection(titration, subfolder)

Run pre-fit detection of bad wells and write discarded_wells.txt.

Parameters:

• titration (clophfit.prtecan.titration.Titration)

• subfolder (pathlib.Path)

Return type:

None

clophfit.prtecan.export.export_fit(titration, subfolder, config)

Export all fitted parameters, plots, and data files.

Parameters:

• titration (clophfit.prtecan.titration.Titration)

• subfolder (pathlib.Path)

• config (clophfit.prtecan.titration.TecanConfig)

Return type:

None

clophfit.prtecan.export.export_data_fit(titration, tecan_config)

Export dat files [x,y1,..,yN] from copy of titration.data.

Parameters:

• titration (clophfit.prtecan.titration.Titration)

• tecan_config (clophfit.prtecan.titration.TecanConfig)

Return type:

None